Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.09■□□□□ 0.97
Lmcd1Q8VEE1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lmcd1Q8VEE1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Lmcd1Q8VEE1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.08■□□□□ 0.97
Lmcd1Q8VEE1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lmcd1Q8VEE1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Lmcd1Q8VEE1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lmcd1Q8VEE1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Lmcd1Q8VEE1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lmcd1Q8VEE1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lmcd1Q8VEE1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lmcd1Q8VEE1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lmcd1Q8VEE1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lmcd1Q8VEE1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Gm13534-201ENSMUST00000121169 513 ntBASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lmcd1Q8VEE1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Gm26524-201ENSMUST00000192339 390 ntBASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lmcd1Q8VEE1 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.03■□□□□ 0.96
Lmcd1Q8VEE1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lmcd1Q8VEE1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Lmcd1Q8VEE1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Lmcd1Q8VEE1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lmcd1Q8VEE1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lmcd1Q8VEE1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Rab3c-203ENSMUST00000224180 967 ntBASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lmcd1Q8VEE1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 CT030146.1-201ENSMUST00000220919 217 ntBASIC21■□□□□ 0.95
Lmcd1Q8VEE1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lmcd1Q8VEE1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lmcd1Q8VEE1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms