Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slf1Q8R3P9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.77■□□□□ 0.76
Slf1Q8R3P9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Slf1Q8R3P9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slf1Q8R3P9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slf1Q8R3P9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slf1Q8R3P9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.77■□□□□ 0.76
Slf1Q8R3P9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slf1Q8R3P9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Slf1Q8R3P9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slf1Q8R3P9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slf1Q8R3P9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slf1Q8R3P9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.74■□□□□ 0.75
Slf1Q8R3P9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slf1Q8R3P9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.72■□□□□ 0.75
Slf1Q8R3P9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms