Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubqln1Q8R317 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ubqln1Q8R317 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.55■□□□□ 0.56
Ubqln1Q8R317 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Gm43137-201ENSMUST00000198052 594 ntBASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ubqln1Q8R317 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ubqln1Q8R317 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.52■□□□□ 0.56
Ubqln1Q8R317 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Gm12821-201ENSMUST00000120022 600 ntBASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ubqln1Q8R317 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ubqln1Q8R317 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Iqck-206ENSMUST00000208658 2891 ntBASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ubqln1Q8R317 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ubqln1Q8R317 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubqln1Q8R317 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms