Protein–RNA interactions for Protein: Q8K3D3

Swi5, DNA repair protein SWI5 homolog, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swi5Q8K3D3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Swi5Q8K3D3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Swi5Q8K3D3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.81■□□□□ 0.44
Swi5Q8K3D3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Swi5Q8K3D3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Swi5Q8K3D3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Swi5Q8K3D3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Swi5Q8K3D3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.77■□□□□ 0.44
Swi5Q8K3D3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Swi5Q8K3D3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Swi5Q8K3D3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Swi5Q8K3D3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Swi5Q8K3D3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Swi5Q8K3D3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.74■□□□□ 0.43
Swi5Q8K3D3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Swi5Q8K3D3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.73■□□□□ 0.43
Swi5Q8K3D3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Swi5Q8K3D3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.73■□□□□ 0.43
Swi5Q8K3D3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Swi5Q8K3D3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Swi5Q8K3D3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Swi5Q8K3D3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Swi5Q8K3D3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Swi5Q8K3D3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Swi5Q8K3D3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Swi5Q8K3D3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Swi5Q8K3D3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms