Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.28□□□□□ -0.44
Cystm1Q8K353 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC12.28□□□□□ -0.44
Cystm1Q8K353 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC12.28□□□□□ -0.44
Cystm1Q8K353 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cystm1Q8K353 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cystm1Q8K353 Gm44949-201ENSMUST00000206423 1450 ntBASIC12.27□□□□□ -0.44
Cystm1Q8K353 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cystm1Q8K353 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cystm1Q8K353 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cystm1Q8K353 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cystm1Q8K353 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cystm1Q8K353 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cystm1Q8K353 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Gm13238-201ENSMUST00000117655 780 ntBASIC12.27□□□□□ -0.45
Cystm1Q8K353 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.27□□□□□ -0.45
Cystm1Q8K353 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cystm1Q8K353 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.27□□□□□ -0.45
Cystm1Q8K353 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cystm1Q8K353 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cystm1Q8K353 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cystm1Q8K353 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cystm1Q8K353 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cystm1Q8K353 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cystm1Q8K353 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cystm1Q8K353 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cystm1Q8K353 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cystm1Q8K353 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.25□□□□□ -0.45
Cystm1Q8K353 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cystm1Q8K353 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.25□□□□□ -0.45
Cystm1Q8K353 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cystm1Q8K353 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Rps24-207ENSMUST00000224568 714 ntBASIC12.24□□□□□ -0.45
Cystm1Q8K353 AC164883.3-201ENSMUST00000227396 1774 ntBASIC12.24□□□□□ -0.45
Cystm1Q8K353 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cystm1Q8K353 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cystm1Q8K353 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.23□□□□□ -0.45
Cystm1Q8K353 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cystm1Q8K353 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms