Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl47Q8K2Y7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl47Q8K2Y7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl47Q8K2Y7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl47Q8K2Y7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl47Q8K2Y7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl47Q8K2Y7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mrpl47Q8K2Y7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Etf1-202ENSMUST00000180351 108 ntBASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.41■□□□□ 0.7
Mrpl47Q8K2Y7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl47Q8K2Y7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl47Q8K2Y7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl47Q8K2Y7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl47Q8K2Y7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl47Q8K2Y7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl47Q8K2Y7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Mrpl47Q8K2Y7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mrpl47Q8K2Y7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mrpl47Q8K2Y7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mrpl47Q8K2Y7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Gm15820-201ENSMUST00000201566 728 ntBASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mrpl47Q8K2Y7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mrpl47Q8K2Y7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl47Q8K2Y7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mrpl47Q8K2Y7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mrpl47Q8K2Y7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.36■□□□□ 0.69
Mrpl47Q8K2Y7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Mrpl47Q8K2Y7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mrpl47Q8K2Y7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mrpl47Q8K2Y7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mrpl47Q8K2Y7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms