Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp1Q8K021 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp1Q8K021 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scamp1Q8K021 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp1Q8K021 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.22■□□□□ 0.67
Scamp1Q8K021 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Gm42642-201ENSMUST00000200683 355 ntBASIC19.22■□□□□ 0.67
Scamp1Q8K021 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.22■□□□□ 0.67
Scamp1Q8K021 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.21■□□□□ 0.67
Scamp1Q8K021 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.21■□□□□ 0.67
Scamp1Q8K021 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scamp1Q8K021 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.2■□□□□ 0.66
Scamp1Q8K021 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scamp1Q8K021 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Gm10849-201ENSMUST00000100397 618 ntBASIC19.19■□□□□ 0.66
Scamp1Q8K021 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scamp1Q8K021 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp1Q8K021 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp1Q8K021 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp1Q8K021 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp1Q8K021 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.18■□□□□ 0.66
Scamp1Q8K021 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scamp1Q8K021 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Gm9988-201ENSMUST00000069786 435 ntBASIC19.17■□□□□ 0.66
Scamp1Q8K021 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scamp1Q8K021 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scamp1Q8K021 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.15■□□□□ 0.66
Scamp1Q8K021 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scamp1Q8K021 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Scamp1Q8K021 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scamp1Q8K021 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scamp1Q8K021 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms