Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rp1l1Q8CGM2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rp1l1Q8CGM2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.8■□□□□ 0.92
Rp1l1Q8CGM2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rp1l1Q8CGM2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.8■□□□□ 0.92
Rp1l1Q8CGM2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rp1l1Q8CGM2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rp1l1Q8CGM2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1l1Q8CGM2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1l1Q8CGM2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Gm27275-201ENSMUST00000184318 272 ntBASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.77■□□□□ 0.92
Rp1l1Q8CGM2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1l1Q8CGM2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1l1Q8CGM2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1l1Q8CGM2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rp1l1Q8CGM2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1l1Q8CGM2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rp1l1Q8CGM2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1l1Q8CGM2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1l1Q8CGM2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1l1Q8CGM2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rp1l1Q8CGM2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rp1l1Q8CGM2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Rp1l1Q8CGM2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.72■□□□□ 0.91
Rp1l1Q8CGM2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rp1l1Q8CGM2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rp1l1Q8CGM2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms