Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cabcoco1Q8CDT7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cabcoco1Q8CDT7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cabcoco1Q8CDT7 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.25■□□□□ 0.67
Cabcoco1Q8CDT7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.25■□□□□ 0.67
Cabcoco1Q8CDT7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cabcoco1Q8CDT7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cabcoco1Q8CDT7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cabcoco1Q8CDT7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cabcoco1Q8CDT7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cabcoco1Q8CDT7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cabcoco1Q8CDT7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cabcoco1Q8CDT7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cabcoco1Q8CDT7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cabcoco1Q8CDT7 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.2■□□□□ 0.66
Cabcoco1Q8CDT7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cabcoco1Q8CDT7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cabcoco1Q8CDT7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cabcoco1Q8CDT7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cabcoco1Q8CDT7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cabcoco1Q8CDT7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cabcoco1Q8CDT7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.18■□□□□ 0.66
Cabcoco1Q8CDT7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cabcoco1Q8CDT7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cabcoco1Q8CDT7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cabcoco1Q8CDT7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms