Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rsph4aQ8BYM7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Rsph4aQ8BYM7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rsph4aQ8BYM7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rsph4aQ8BYM7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rsph4aQ8BYM7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Rsph4aQ8BYM7 Gm26524-201ENSMUST00000192339 390 ntBASIC28.25■■■□□ 2.11
Rsph4aQ8BYM7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rsph4aQ8BYM7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Rsph4aQ8BYM7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rsph4aQ8BYM7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Rsph4aQ8BYM7 Gm18558-201ENSMUST00000186253 1214 ntBASIC28.24■■■□□ 2.11
Rsph4aQ8BYM7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rsph4aQ8BYM7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 Gm42911-201ENSMUST00000199360 1630 ntBASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 Gm7977-201ENSMUST00000193787 748 ntBASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 Gm45691-201ENSMUST00000206905 1120 ntBASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 AC158538.1-201ENSMUST00000225870 294 ntBASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rsph4aQ8BYM7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Rab3c-203ENSMUST00000224180 967 ntBASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Rsph4aQ8BYM7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC28.21■■■□□ 2.11
Rsph4aQ8BYM7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Rsph4aQ8BYM7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Rsph4aQ8BYM7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC28.2■■■□□ 2.1
Rsph4aQ8BYM7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Rsph4aQ8BYM7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC28.19■■■□□ 2.1
Rsph4aQ8BYM7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC28.19■■■□□ 2.1
Rsph4aQ8BYM7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rsph4aQ8BYM7 AC154266.1-201ENSMUST00000223190 503 ntBASIC28.19■■■□□ 2.1
Rsph4aQ8BYM7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rsph4aQ8BYM7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rsph4aQ8BYM7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rsph4aQ8BYM7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
Rsph4aQ8BYM7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rsph4aQ8BYM7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
Rsph4aQ8BYM7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Rsph4aQ8BYM7 Gm13181-201ENSMUST00000120117 1069 ntBASIC28.17■■■□□ 2.1
Rsph4aQ8BYM7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rsph4aQ8BYM7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rsph4aQ8BYM7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC28.16■■■□□ 2.1
Rsph4aQ8BYM7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rsph4aQ8BYM7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rsph4aQ8BYM7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rsph4aQ8BYM7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC28.15■■■□□ 2.1
Rsph4aQ8BYM7 Gm29241-201ENSMUST00000189260 1096 ntBASIC28.15■■■□□ 2.1
Rsph4aQ8BYM7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC28.15■■■□□ 2.1
Rsph4aQ8BYM7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rsph4aQ8BYM7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rsph4aQ8BYM7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rsph4aQ8BYM7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Rsph4aQ8BYM7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Rsph4aQ8BYM7 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC28.14■■■□□ 2.1
Rsph4aQ8BYM7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rsph4aQ8BYM7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
Rsph4aQ8BYM7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC28.14■■■□□ 2.09
Rsph4aQ8BYM7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Mir6982-201ENSMUST00000184354 68 ntBASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Rsph4aQ8BYM7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Rsph4aQ8BYM7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC28.12■■■□□ 2.09
Rsph4aQ8BYM7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC28.12■■■□□ 2.09
Rsph4aQ8BYM7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rsph4aQ8BYM7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Rsph4aQ8BYM7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Rsph4aQ8BYM7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC28.12■■■□□ 2.09
Rsph4aQ8BYM7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Rsph4aQ8BYM7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms