Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Suds3Q8BR65 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Gm12821-201ENSMUST00000120022 600 ntBASIC20.02■□□□□ 0.8
Suds3Q8BR65 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Gm43530-201ENSMUST00000195920 274 ntBASIC20.02■□□□□ 0.8
Suds3Q8BR65 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Suds3Q8BR65 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.02■□□□□ 0.79
Suds3Q8BR65 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Suds3Q8BR65 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.01■□□□□ 0.79
Suds3Q8BR65 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Suds3Q8BR65 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20■□□□□ 0.79
Suds3Q8BR65 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20■□□□□ 0.79
Suds3Q8BR65 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Suds3Q8BR65 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20■□□□□ 0.79
Suds3Q8BR65 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Suds3Q8BR65 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Suds3Q8BR65 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Suds3Q8BR65 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Suds3Q8BR65 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Suds3Q8BR65 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.99■□□□□ 0.79
Suds3Q8BR65 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Suds3Q8BR65 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.99■□□□□ 0.79
Suds3Q8BR65 Golph3-202ENSMUST00000226517 2359 ntBASIC19.99■□□□□ 0.79
Suds3Q8BR65 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Suds3Q8BR65 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Suds3Q8BR65 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Suds3Q8BR65 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Suds3Q8BR65 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Suds3Q8BR65 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Suds3Q8BR65 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Suds3Q8BR65 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.95■□□□□ 0.78
Suds3Q8BR65 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Suds3Q8BR65 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms