Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf18Q8BM39 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf18Q8BM39 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf18Q8BM39 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Prpf18Q8BM39 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Prpf18Q8BM39 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Prpf18Q8BM39 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf18Q8BM39 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Prpf18Q8BM39 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Gm15820-201ENSMUST00000201566 728 ntBASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf18Q8BM39 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms