Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Gm42911-201ENSMUST00000199360 1630 ntBASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Col16a1Q8BLX7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col16a1Q8BLX7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC26.25■■□□□ 1.79
Col16a1Q8BLX7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col16a1Q8BLX7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col16a1Q8BLX7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col16a1Q8BLX7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col16a1Q8BLX7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col16a1Q8BLX7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Col16a1Q8BLX7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Col16a1Q8BLX7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col16a1Q8BLX7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
Col16a1Q8BLX7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col16a1Q8BLX7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Col16a1Q8BLX7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col16a1Q8BLX7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Gm38205-201ENSMUST00000192243 258 ntBASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Gm5408-201ENSMUST00000197998 747 ntBASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Col16a1Q8BLX7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col16a1Q8BLX7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Col16a1Q8BLX7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col16a1Q8BLX7 Gm13168-201ENSMUST00000121771 632 ntBASIC26.2■■□□□ 1.78
Col16a1Q8BLX7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC26.2■■□□□ 1.78
Col16a1Q8BLX7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col16a1Q8BLX7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Col16a1Q8BLX7 Gm10655-201ENSMUST00000098658 1397 ntBASIC26.19■■□□□ 1.78
Col16a1Q8BLX7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC26.19■■□□□ 1.78
Col16a1Q8BLX7 Gm6211-202ENSMUST00000167849 925 ntBASIC26.19■■□□□ 1.78
Col16a1Q8BLX7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Col16a1Q8BLX7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC26.19■■□□□ 1.78
Col16a1Q8BLX7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col16a1Q8BLX7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col16a1Q8BLX7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col16a1Q8BLX7 Gm37856-201ENSMUST00000191634 999 ntBASIC26.18■■□□□ 1.78
Col16a1Q8BLX7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col16a1Q8BLX7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col16a1Q8BLX7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col16a1Q8BLX7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col16a1Q8BLX7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col16a1Q8BLX7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col16a1Q8BLX7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 Gm13534-201ENSMUST00000121169 513 ntBASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 AC122769.4-201ENSMUST00000228166 901 ntBASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col16a1Q8BLX7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Gm6420-201ENSMUST00000193885 723 ntBASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Col16a1Q8BLX7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col16a1Q8BLX7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col16a1Q8BLX7 Gm26524-201ENSMUST00000192339 390 ntBASIC26.14■■□□□ 1.78
Col16a1Q8BLX7 Gm6365-201ENSMUST00000054711 744 ntBASIC26.14■■□□□ 1.78
Col16a1Q8BLX7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Col16a1Q8BLX7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.77
Col16a1Q8BLX7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Col16a1Q8BLX7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms