Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn3Q8BHH8 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.32■□□□□ 0.52
Clrn3Q8BHH8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Clrn3Q8BHH8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn3Q8BHH8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn3Q8BHH8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.28■□□□□ 0.52
Clrn3Q8BHH8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn3Q8BHH8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Clrn3Q8BHH8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clrn3Q8BHH8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
Clrn3Q8BHH8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Clrn3Q8BHH8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clrn3Q8BHH8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn3Q8BHH8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms