Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Gm45102-201ENSMUST00000207427 857 ntBASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smndc1Q8BGT7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Etf1-202ENSMUST00000180351 108 ntBASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smndc1Q8BGT7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.9■□□□□ 0.62
Smndc1Q8BGT7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Smndc1Q8BGT7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smndc1Q8BGT7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smndc1Q8BGT7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smndc1Q8BGT7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smndc1Q8BGT7 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.88■□□□□ 0.61
Smndc1Q8BGT7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smndc1Q8BGT7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.88■□□□□ 0.61
Smndc1Q8BGT7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.88■□□□□ 0.61
Smndc1Q8BGT7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smndc1Q8BGT7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smndc1Q8BGT7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smndc1Q8BGT7 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smndc1Q8BGT7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smndc1Q8BGT7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smndc1Q8BGT7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms