Protein–RNA interactions for Protein: Q810U5

Ccdc50, Coiled-coil domain-containing protein 50, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50Q810U5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc50Q810U5 Gm27502-201ENSMUST00000183495 199 ntBASIC19.46■□□□□ 0.71
Ccdc50Q810U5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc50Q810U5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc50Q810U5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.44■□□□□ 0.7
Ccdc50Q810U5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc50Q810U5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc50Q810U5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ccdc50Q810U5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc50Q810U5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc50Q810U5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Gm11175-201ENSMUST00000116172 543 ntBASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc50Q810U5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms