Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk3bQ80YF6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk3bQ80YF6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk3bQ80YF6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Upk3bQ80YF6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk3bQ80YF6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Upk3bQ80YF6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.58■□□□□ 0.25
Upk3bQ80YF6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upk3bQ80YF6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upk3bQ80YF6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Upk3bQ80YF6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Upk3bQ80YF6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Upk3bQ80YF6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Gm40881-201ENSMUST00000223397 166 ntBASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Upk3bQ80YF6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Cap2-205ENSMUST00000225824 1634 ntBASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Upk3bQ80YF6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk3bQ80YF6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Upk3bQ80YF6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk3bQ80YF6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Upk3bQ80YF6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Upk3bQ80YF6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.53■□□□□ 0.24
Upk3bQ80YF6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Upk3bQ80YF6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Gm43530-201ENSMUST00000195920 274 ntBASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Upk3bQ80YF6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk3bQ80YF6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Upk3bQ80YF6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk3bQ80YF6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk3bQ80YF6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Upk3bQ80YF6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Upk3bQ80YF6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms