Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdh8Q7TSK3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh8Q7TSK3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh8Q7TSK3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdh8Q7TSK3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh8Q7TSK3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Gm42569-201ENSMUST00000200539 472 ntBASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh8Q7TSK3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh8Q7TSK3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh8Q7TSK3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdh8Q7TSK3 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.33■□□□□ 0.69
Pcdh8Q7TSK3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh8Q7TSK3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh8Q7TSK3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh8Q7TSK3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh8Q7TSK3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh8Q7TSK3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Gm26571-201ENSMUST00000181399 666 ntBASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh8Q7TSK3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms