Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Otub1Q7TQI3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.64■□□□□ 0.58
Otub1Q7TQI3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Otub1Q7TQI3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Otub1Q7TQI3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Otub1Q7TQI3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Otub1Q7TQI3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Otub1Q7TQI3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Otub1Q7TQI3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Otub1Q7TQI3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Otub1Q7TQI3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Otub1Q7TQI3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.58■□□□□ 0.57
Otub1Q7TQI3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Otub1Q7TQI3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Otub1Q7TQI3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.58■□□□□ 0.56
Otub1Q7TQI3 Gm43530-201ENSMUST00000195920 274 ntBASIC18.58■□□□□ 0.56
Otub1Q7TQI3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Otub1Q7TQI3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Otub1Q7TQI3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms