Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Commd3Q63829 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Commd3Q63829 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Commd3Q63829 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Commd3Q63829 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Commd3Q63829 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.34■□□□□ 0.21
Commd3Q63829 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.34■□□□□ 0.21
Commd3Q63829 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.34■□□□□ 0.21
Commd3Q63829 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Commd3Q63829 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Commd3Q63829 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Commd3Q63829 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.33■□□□□ 0.21
Commd3Q63829 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Commd3Q63829 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Commd3Q63829 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Commd3Q63829 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Commd3Q63829 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Commd3Q63829 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Commd3Q63829 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Commd3Q63829 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Commd3Q63829 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Commd3Q63829 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.32■□□□□ 0.2
Commd3Q63829 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Commd3Q63829 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Commd3Q63829 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Commd3Q63829 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Commd3Q63829 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Commd3Q63829 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Commd3Q63829 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Commd3Q63829 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.31■□□□□ 0.2
Commd3Q63829 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Commd3Q63829 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.31■□□□□ 0.2
Commd3Q63829 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Commd3Q63829 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Commd3Q63829 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.3■□□□□ 0.2
Commd3Q63829 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Commd3Q63829 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.3■□□□□ 0.2
Commd3Q63829 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Commd3Q63829 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Commd3Q63829 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Commd3Q63829 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Commd3Q63829 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Commd3Q63829 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Commd3Q63829 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Commd3Q63829 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Commd3Q63829 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
Commd3Q63829 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.27■□□□□ 0.2
Commd3Q63829 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Commd3Q63829 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Commd3Q63829 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms