Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.74■□□□□ 0.27
Sox19Q62249 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox19Q62249 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.74■□□□□ 0.27
Sox19Q62249 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox19Q62249 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sox19Q62249 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sox19Q62249 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox19Q62249 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox19Q62249 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.73■□□□□ 0.27
Sox19Q62249 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Sox19Q62249 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox19Q62249 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Sox19Q62249 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox19Q62249 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sox19Q62249 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sox19Q62249 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.72■□□□□ 0.27
Sox19Q62249 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sox19Q62249 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox19Q62249 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sox19Q62249 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Sox19Q62249 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox19Q62249 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sox19Q62249 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sox19Q62249 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox19Q62249 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox19Q62249 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.7■□□□□ 0.26
Sox19Q62249 Gm12366-201ENSMUST00000121722 873 ntBASIC16.7■□□□□ 0.26
Sox19Q62249 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.7■□□□□ 0.26
Sox19Q62249 Gm10399-202ENSMUST00000202768 748 ntBASIC16.7■□□□□ 0.26
Sox19Q62249 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.7■□□□□ 0.26
Sox19Q62249 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Gm5786-201ENSMUST00000085368 882 ntBASIC16.7■□□□□ 0.26
Sox19Q62249 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Sox19Q62249 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox19Q62249 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.69■□□□□ 0.26
Sox19Q62249 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Sox19Q62249 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Sox19Q62249 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox19Q62249 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sox19Q62249 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox19Q62249 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox19Q62249 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.68■□□□□ 0.26
Sox19Q62249 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox19Q62249 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.68■□□□□ 0.26
Sox19Q62249 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sox19Q62249 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox19Q62249 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.68■□□□□ 0.26
Sox19Q62249 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox19Q62249 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox19Q62249 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox19Q62249 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox19Q62249 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox19Q62249 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sox19Q62249 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox19Q62249 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sox19Q62249 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms