Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Gm14117-201ENSMUST00000122417 843 ntBASIC20.67■□□□□ 0.9
Trim21Q62191 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim21Q62191 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim21Q62191 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim21Q62191 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim21Q62191 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim21Q62191 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim21Q62191 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim21Q62191 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim21Q62191 Gm45102-201ENSMUST00000207427 857 ntBASIC20.66■□□□□ 0.9
Trim21Q62191 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.66■□□□□ 0.9
Trim21Q62191 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim21Q62191 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim21Q62191 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim21Q62191 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim21Q62191 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim21Q62191 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim21Q62191 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim21Q62191 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim21Q62191 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim21Q62191 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim21Q62191 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim21Q62191 Rps24-207ENSMUST00000224568 714 ntBASIC20.65■□□□□ 0.9
Trim21Q62191 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trim21Q62191 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim21Q62191 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim21Q62191 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Trim21Q62191 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.64■□□□□ 0.9
Trim21Q62191 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim21Q62191 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim21Q62191 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim21Q62191 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.64■□□□□ 0.89
Trim21Q62191 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim21Q62191 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Trim21Q62191 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim21Q62191 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim21Q62191 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.63■□□□□ 0.89
Trim21Q62191 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim21Q62191 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim21Q62191 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim21Q62191 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trim21Q62191 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim21Q62191 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim21Q62191 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Trim21Q62191 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim21Q62191 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim21Q62191 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim21Q62191 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim21Q62191 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim21Q62191 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim21Q62191 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim21Q62191 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Trim21Q62191 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim21Q62191 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim21Q62191 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim21Q62191 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim21Q62191 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim21Q62191 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim21Q62191 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim21Q62191 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim21Q62191 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim21Q62191 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim21Q62191 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.59■□□□□ 0.89
Trim21Q62191 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim21Q62191 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim21Q62191 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Trim21Q62191 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim21Q62191 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim21Q62191 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim21Q62191 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim21Q62191 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.58■□□□□ 0.89
Trim21Q62191 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
Trim21Q62191 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.58■□□□□ 0.88
Trim21Q62191 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim21Q62191 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim21Q62191 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Trim21Q62191 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim21Q62191 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.58■□□□□ 0.88
Trim21Q62191 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim21Q62191 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim21Q62191 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trim21Q62191 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim21Q62191 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim21Q62191 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim21Q62191 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim21Q62191 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim21Q62191 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim21Q62191 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim21Q62191 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.56■□□□□ 0.88
Trim21Q62191 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim21Q62191 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim21Q62191 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim21Q62191 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim21Q62191 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Trim21Q62191 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim21Q62191 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim21Q62191 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim21Q62191 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim21Q62191 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim21Q62191 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms