Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd47Q61735 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd47Q61735 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cd47Q61735 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cd47Q61735 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Mir6236-201ENSMUST00000184437 123 ntBASIC17.81■□□□□ 0.44
Cd47Q61735 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.81■□□□□ 0.44
Cd47Q61735 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cd47Q61735 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd47Q61735 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd47Q61735 Gm22238-201ENSMUST00000175222 88 ntBASIC17.8■□□□□ 0.44
Cd47Q61735 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd47Q61735 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cd47Q61735 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd47Q61735 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Cd47Q61735 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.79■□□□□ 0.44
Cd47Q61735 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cd47Q61735 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd47Q61735 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd47Q61735 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd47Q61735 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd47Q61735 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd47Q61735 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd47Q61735 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd47Q61735 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd47Q61735 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cd47Q61735 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cd47Q61735 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.77■□□□□ 0.44
Cd47Q61735 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.77■□□□□ 0.44
Cd47Q61735 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd47Q61735 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd47Q61735 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.77■□□□□ 0.44
Cd47Q61735 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.77■□□□□ 0.44
Cd47Q61735 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
Cd47Q61735 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd47Q61735 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd47Q61735 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd47Q61735 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd47Q61735 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd47Q61735 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd47Q61735 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd47Q61735 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cd47Q61735 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.76■□□□□ 0.43
Cd47Q61735 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd47Q61735 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd47Q61735 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd47Q61735 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cd47Q61735 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd47Q61735 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.76■□□□□ 0.43
Cd47Q61735 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd47Q61735 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.75■□□□□ 0.43
Cd47Q61735 Gm45102-201ENSMUST00000207427 857 ntBASIC17.75■□□□□ 0.43
Cd47Q61735 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd47Q61735 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd47Q61735 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cd47Q61735 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd47Q61735 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cd47Q61735 Gm14117-201ENSMUST00000122417 843 ntBASIC17.74■□□□□ 0.43
Cd47Q61735 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cd47Q61735 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd47Q61735 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cd47Q61735 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd47Q61735 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd47Q61735 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cd47Q61735 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.73■□□□□ 0.43
Cd47Q61735 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Cd47Q61735 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.73■□□□□ 0.43
Cd47Q61735 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.73■□□□□ 0.43
Cd47Q61735 Rps24-207ENSMUST00000224568 714 ntBASIC17.73■□□□□ 0.43
Cd47Q61735 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms