Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1eQ61290 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.48■□□□□ 0.71
Cacna1eQ61290 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1eQ61290 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.48■□□□□ 0.71
Cacna1eQ61290 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cacna1eQ61290 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Gm7290-201ENSMUST00000104990 617 ntBASIC19.47■□□□□ 0.71
Cacna1eQ61290 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Gm12918-201ENSMUST00000120234 636 ntBASIC19.47■□□□□ 0.71
Cacna1eQ61290 Gm15710-201ENSMUST00000121821 636 ntBASIC19.47■□□□□ 0.71
Cacna1eQ61290 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.47■□□□□ 0.71
Cacna1eQ61290 Gm5075-201ENSMUST00000196916 622 ntBASIC19.47■□□□□ 0.71
Cacna1eQ61290 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.47■□□□□ 0.71
Cacna1eQ61290 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.47■□□□□ 0.71
Cacna1eQ61290 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Cacna1eQ61290 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1eQ61290 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.46■□□□□ 0.71
Cacna1eQ61290 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cacna1eQ61290 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1eQ61290 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1eQ61290 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.46■□□□□ 0.71
Cacna1eQ61290 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Cacna1eQ61290 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1eQ61290 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.45■□□□□ 0.7
Cacna1eQ61290 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1eQ61290 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1eQ61290 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Gm12527-201ENSMUST00000117967 564 ntBASIC19.44■□□□□ 0.7
Cacna1eQ61290 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.44■□□□□ 0.7
Cacna1eQ61290 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cacna1eQ61290 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.43■□□□□ 0.7
Cacna1eQ61290 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1eQ61290 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.43■□□□□ 0.7
Cacna1eQ61290 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.43■□□□□ 0.7
Cacna1eQ61290 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.43■□□□□ 0.7
Cacna1eQ61290 Gm10653-202ENSMUST00000139570 835 ntBASIC19.42■□□□□ 0.7
Cacna1eQ61290 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.42■□□□□ 0.7
Cacna1eQ61290 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1eQ61290 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cacna1eQ61290 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1eQ61290 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1eQ61290 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cacna1eQ61290 Gm13534-201ENSMUST00000121169 513 ntBASIC19.42■□□□□ 0.7
Cacna1eQ61290 Gm26524-201ENSMUST00000192339 390 ntBASIC19.42■□□□□ 0.7
Cacna1eQ61290 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1eQ61290 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1eQ61290 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1eQ61290 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Cacna1eQ61290 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1eQ61290 Gm38205-201ENSMUST00000192243 258 ntBASIC19.41■□□□□ 0.7
Cacna1eQ61290 Gm6365-201ENSMUST00000054711 744 ntBASIC19.41■□□□□ 0.7
Cacna1eQ61290 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Cacna1eQ61290 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1eQ61290 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.4■□□□□ 0.7
Cacna1eQ61290 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.4■□□□□ 0.7
Cacna1eQ61290 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1eQ61290 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.4■□□□□ 0.7
Cacna1eQ61290 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cacna1eQ61290 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms