Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.26■□□□□ 0.83
Satb1Q60611 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Satb1Q60611 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Satb1Q60611 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.26■□□□□ 0.83
Satb1Q60611 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Satb1Q60611 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Satb1Q60611 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Satb1Q60611 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Satb1Q60611 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.26■□□□□ 0.83
Satb1Q60611 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
Satb1Q60611 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Satb1Q60611 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Satb1Q60611 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Satb1Q60611 Gm9988-201ENSMUST00000069786 435 ntBASIC20.25■□□□□ 0.83
Satb1Q60611 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Satb1Q60611 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Satb1Q60611 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Satb1Q60611 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Satb1Q60611 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Satb1Q60611 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Satb1Q60611 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Satb1Q60611 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Satb1Q60611 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Satb1Q60611 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Satb1Q60611 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Satb1Q60611 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Satb1Q60611 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.23■□□□□ 0.83
Satb1Q60611 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Satb1Q60611 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.23■□□□□ 0.83
Satb1Q60611 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Satb1Q60611 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Satb1Q60611 Gm43530-201ENSMUST00000195920 274 ntBASIC20.23■□□□□ 0.83
Satb1Q60611 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Satb1Q60611 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Satb1Q60611 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Satb1Q60611 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Satb1Q60611 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.22■□□□□ 0.83
Satb1Q60611 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.22■□□□□ 0.83
Satb1Q60611 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Satb1Q60611 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Satb1Q60611 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Satb1Q60611 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Satb1Q60611 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.22■□□□□ 0.83
Satb1Q60611 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Satb1Q60611 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Satb1Q60611 Gm4968-201ENSMUST00000071458 858 ntBASIC20.22■□□□□ 0.83
Satb1Q60611 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Satb1Q60611 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Satb1Q60611 Gm11421-201ENSMUST00000122124 294 ntBASIC20.21■□□□□ 0.83
Satb1Q60611 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.21■□□□□ 0.83
Satb1Q60611 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Satb1Q60611 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.21■□□□□ 0.83
Satb1Q60611 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.2■□□□□ 0.83
Satb1Q60611 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Satb1Q60611 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.2■□□□□ 0.82
Satb1Q60611 Mir5133-201ENSMUST00000174955 77 ntBASIC20.2■□□□□ 0.82
Satb1Q60611 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.2■□□□□ 0.82
Satb1Q60611 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.2■□□□□ 0.82
Satb1Q60611 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Satb1Q60611 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Satb1Q60611 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.19■□□□□ 0.82
Satb1Q60611 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Satb1Q60611 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Satb1Q60611 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Satb1Q60611 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Satb1Q60611 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Satb1Q60611 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Satb1Q60611 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Satb1Q60611 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.18■□□□□ 0.82
Satb1Q60611 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Satb1Q60611 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.18■□□□□ 0.82
Satb1Q60611 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Satb1Q60611 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.18■□□□□ 0.82
Satb1Q60611 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Satb1Q60611 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms