Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc85aQ5SP85 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ccdc85aQ5SP85 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc85aQ5SP85 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc85aQ5SP85 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc85aQ5SP85 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc85aQ5SP85 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc85aQ5SP85 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc85aQ5SP85 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc85aQ5SP85 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ccdc85aQ5SP85 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.77■■□□□ 1.08
Ccdc85aQ5SP85 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc85aQ5SP85 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc85aQ5SP85 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Gm6420-201ENSMUST00000193885 723 ntBASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc85aQ5SP85 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc85aQ5SP85 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Gm7290-201ENSMUST00000104990 617 ntBASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Gm12918-201ENSMUST00000120234 636 ntBASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Gm15710-201ENSMUST00000121821 636 ntBASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Gm5075-201ENSMUST00000196916 622 ntBASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc85aQ5SP85 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc85aQ5SP85 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Ccdc85aQ5SP85 Gm22325-201ENSMUST00000158904 308 ntBASIC21.73■■□□□ 1.07
Ccdc85aQ5SP85 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc85aQ5SP85 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc85aQ5SP85 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc85aQ5SP85 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.72■■□□□ 1.07
Ccdc85aQ5SP85 Gm38205-201ENSMUST00000192243 258 ntBASIC21.72■■□□□ 1.07
Ccdc85aQ5SP85 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.72■■□□□ 1.07
Ccdc85aQ5SP85 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc85aQ5SP85 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Gm20049-201ENSMUST00000219950 730 ntBASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Gm10812-201ENSMUST00000099864 546 ntBASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc85aQ5SP85 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc85aQ5SP85 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc85aQ5SP85 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 Gm13146-201ENSMUST00000118508 780 ntBASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc85aQ5SP85 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc85aQ5SP85 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc85aQ5SP85 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms