Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Gm43530-201ENSMUST00000195920 274 ntBASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav7d-3Q5R1I1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Golph3-202ENSMUST00000226517 2359 ntBASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Gm15546-201ENSMUST00000122095 826 ntBASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7d-3Q5R1I1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav7d-3Q5R1I1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7d-3Q5R1I1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7d-3Q5R1I1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Etf1-202ENSMUST00000180351 108 ntBASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7d-3Q5R1I1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav7d-3Q5R1I1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav7d-3Q5R1I1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms