Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Pds5bQ4VA53 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Pds5bQ4VA53 AC153881.1-201ENSMUST00000214448 284 ntBASIC35.05■■■■□ 3.2
Pds5bQ4VA53 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC35.05■■■■□ 3.2
Pds5bQ4VA53 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Pds5bQ4VA53 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Pds5bQ4VA53 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pds5bQ4VA53 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pds5bQ4VA53 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pds5bQ4VA53 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pds5bQ4VA53 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pds5bQ4VA53 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pds5bQ4VA53 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pds5bQ4VA53 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
Pds5bQ4VA53 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
Pds5bQ4VA53 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
Pds5bQ4VA53 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Pds5bQ4VA53 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Pds5bQ4VA53 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Pds5bQ4VA53 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC35.02■■■■□ 3.2
Pds5bQ4VA53 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
Pds5bQ4VA53 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Pds5bQ4VA53 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC35.02■■■■□ 3.2
Pds5bQ4VA53 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Pds5bQ4VA53 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Pds5bQ4VA53 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC35.01■■■■□ 3.2
Pds5bQ4VA53 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
Pds5bQ4VA53 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Pds5bQ4VA53 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
Pds5bQ4VA53 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC35■■■■□ 3.19
Pds5bQ4VA53 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC35■■■■□ 3.19
Pds5bQ4VA53 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
Pds5bQ4VA53 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Pds5bQ4VA53 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC35■■■■□ 3.19
Pds5bQ4VA53 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Pds5bQ4VA53 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Pds5bQ4VA53 Gm10698-201ENSMUST00000182663 604 ntBASIC34.99■■■■□ 3.19
Pds5bQ4VA53 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC34.99■■■■□ 3.19
Pds5bQ4VA53 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Pds5bQ4VA53 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
Pds5bQ4VA53 Dio3-201ENSMUST00000097228 1449 ntBASIC34.97■■■■□ 3.19
Pds5bQ4VA53 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Pds5bQ4VA53 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Pds5bQ4VA53 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC34.97■■■■□ 3.19
Pds5bQ4VA53 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC34.97■■■■□ 3.19
Pds5bQ4VA53 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC34.97■■■■□ 3.19
Pds5bQ4VA53 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Pds5bQ4VA53 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC34.96■■■■□ 3.19
Pds5bQ4VA53 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC34.96■■■■□ 3.19
Pds5bQ4VA53 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC34.96■■■■□ 3.19
Pds5bQ4VA53 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Pds5bQ4VA53 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Pds5bQ4VA53 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Pds5bQ4VA53 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC34.95■■■■□ 3.18
Pds5bQ4VA53 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC34.94■■■■□ 3.18
Pds5bQ4VA53 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC34.94■■■■□ 3.18
Pds5bQ4VA53 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Pds5bQ4VA53 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC34.94■■■■□ 3.18
Pds5bQ4VA53 Gm9987-201ENSMUST00000069768 567 ntBASIC34.94■■■■□ 3.18
Pds5bQ4VA53 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Pds5bQ4VA53 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Pds5bQ4VA53 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Pds5bQ4VA53 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Pds5bQ4VA53 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Pds5bQ4VA53 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC34.93■■■■□ 3.18
Pds5bQ4VA53 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
Pds5bQ4VA53 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
Pds5bQ4VA53 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC34.92■■■■□ 3.18
Pds5bQ4VA53 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC34.92■■■■□ 3.18
Pds5bQ4VA53 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC34.92■■■■□ 3.18
Pds5bQ4VA53 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Pds5bQ4VA53 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
Pds5bQ4VA53 Gm2559-201ENSMUST00000201323 363 ntBASIC34.91■■■■□ 3.18
Pds5bQ4VA53 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Pds5bQ4VA53 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Pds5bQ4VA53 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
Pds5bQ4VA53 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Pds5bQ4VA53 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
Pds5bQ4VA53 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Pds5bQ4VA53 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Pds5bQ4VA53 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Pds5bQ4VA53 AC131586.2-201ENSMUST00000228370 1512 ntBASIC34.9■■■■□ 3.18
Pds5bQ4VA53 Mir1199-201ENSMUST00000117015 119 ntBASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
Pds5bQ4VA53 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms