Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Herc2Q4U2R1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12□□□□□ -0.49
Herc2Q4U2R1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12□□□□□ -0.49
Herc2Q4U2R1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 Dio3-201ENSMUST00000097228 1449 ntBASIC12□□□□□ -0.49
Herc2Q4U2R1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC12□□□□□ -0.49
Herc2Q4U2R1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Herc2Q4U2R1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Herc2Q4U2R1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Herc2Q4U2R1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Gm10571-201ENSMUST00000097869 1638 ntBASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Herc2Q4U2R1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc2Q4U2R1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc2Q4U2R1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc2Q4U2R1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc2Q4U2R1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Herc2Q4U2R1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Herc2Q4U2R1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC11.96□□□□□ -0.5
Herc2Q4U2R1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Herc2Q4U2R1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Herc2Q4U2R1 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.96□□□□□ -0.5
Herc2Q4U2R1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Herc2Q4U2R1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Gm6345-202ENSMUST00000180900 204 ntBASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.95□□□□□ -0.5
Herc2Q4U2R1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.95□□□□□ -0.5
Herc2Q4U2R1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms