Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Rarb-207ENSMUST00000225921 2756 ntBASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shisa3Q3UPR0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa3Q3UPR0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa3Q3UPR0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa3Q3UPR0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.91■□□□□ 0.3
Shisa3Q3UPR0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.91■□□□□ 0.3
Shisa3Q3UPR0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa3Q3UPR0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shisa3Q3UPR0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Rps24-207ENSMUST00000224568 714 ntBASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Gm9959-201ENSMUST00000068277 390 ntBASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shisa3Q3UPR0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shisa3Q3UPR0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shisa3Q3UPR0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shisa3Q3UPR0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Etf1-202ENSMUST00000180351 108 ntBASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Gm45102-201ENSMUST00000207427 857 ntBASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shisa3Q3UPR0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms