Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm4968-201ENSMUST00000071458 858 ntBASIC29.41■■■□□ 2.3
Arhgef40Q3UPH7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC29.41■■■□□ 2.3
Arhgef40Q3UPH7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC29.41■■■□□ 2.3
Arhgef40Q3UPH7 Gm10252-201ENSMUST00000209541 832 ntBASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 Mir5133-201ENSMUST00000174955 77 ntBASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC29.4■■■□□ 2.3
Arhgef40Q3UPH7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Arhgef40Q3UPH7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Arhgef40Q3UPH7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Arhgef40Q3UPH7 Gm43859-201ENSMUST00000200075 1412 ntBASIC29.39■■■□□ 2.3
Arhgef40Q3UPH7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC29.39■■■□□ 2.3
Arhgef40Q3UPH7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Arhgef40Q3UPH7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Arhgef40Q3UPH7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Arhgef40Q3UPH7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Arhgef40Q3UPH7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Arhgef40Q3UPH7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
Arhgef40Q3UPH7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Arhgef40Q3UPH7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Arhgef40Q3UPH7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC29.37■■■□□ 2.29
Arhgef40Q3UPH7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Arhgef40Q3UPH7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
Arhgef40Q3UPH7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Arhgef40Q3UPH7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC29.36■■■□□ 2.29
Arhgef40Q3UPH7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Arhgef40Q3UPH7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC29.36■■■□□ 2.29
Arhgef40Q3UPH7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Arhgef40Q3UPH7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Arhgef40Q3UPH7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
Arhgef40Q3UPH7 Gm12504-201ENSMUST00000120860 2231 ntBASIC29.34■■■□□ 2.29
Arhgef40Q3UPH7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Arhgef40Q3UPH7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Arhgef40Q3UPH7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Arhgef40Q3UPH7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Arhgef40Q3UPH7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Arhgef40Q3UPH7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Arhgef40Q3UPH7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Arhgef40Q3UPH7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Gm12527-201ENSMUST00000117967 564 ntBASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Arhgef40Q3UPH7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Gm20760-201ENSMUST00000179197 648 ntBASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Gm13534-201ENSMUST00000121169 513 ntBASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC29.3■■■□□ 2.28
Arhgef40Q3UPH7 Gm43909-201ENSMUST00000203443 1876 ntBASIC29.29■■■□□ 2.28
Arhgef40Q3UPH7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Arhgef40Q3UPH7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Arhgef40Q3UPH7 Mir7071-201ENSMUST00000184847 69 ntBASIC29.28■■■□□ 2.28
Arhgef40Q3UPH7 AC154266.1-201ENSMUST00000223190 503 ntBASIC29.28■■■□□ 2.28
Arhgef40Q3UPH7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Arhgef40Q3UPH7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Arhgef40Q3UPH7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms