Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Gm15546-201ENSMUST00000122095 826 ntBASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smu1Q3UKJ7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smu1Q3UKJ7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smu1Q3UKJ7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smu1Q3UKJ7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smu1Q3UKJ7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smu1Q3UKJ7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smu1Q3UKJ7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smu1Q3UKJ7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smu1Q3UKJ7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smu1Q3UKJ7 Gm22238-201ENSMUST00000175222 88 ntBASIC18.76■□□□□ 0.59
Smu1Q3UKJ7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smu1Q3UKJ7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smu1Q3UKJ7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smu1Q3UKJ7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smu1Q3UKJ7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smu1Q3UKJ7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smu1Q3UKJ7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smu1Q3UKJ7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smu1Q3UKJ7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.72■□□□□ 0.59
Smu1Q3UKJ7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
Smu1Q3UKJ7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms