Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col5a2Q3U962 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col5a2Q3U962 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col5a2Q3U962 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col5a2Q3U962 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
Col5a2Q3U962 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Col5a2Q3U962 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Col5a2Q3U962 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col5a2Q3U962 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col5a2Q3U962 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.67■■□□□ 1.38
Col5a2Q3U962 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col5a2Q3U962 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col5a2Q3U962 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Mir6982-201ENSMUST00000184354 68 ntBASIC23.65■■□□□ 1.38
Col5a2Q3U962 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col5a2Q3U962 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col5a2Q3U962 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Col5a2Q3U962 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col5a2Q3U962 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
Col5a2Q3U962 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.64■■□□□ 1.37
Col5a2Q3U962 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col5a2Q3U962 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col5a2Q3U962 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.63■■□□□ 1.37
Col5a2Q3U962 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.63■■□□□ 1.37
Col5a2Q3U962 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Col5a2Q3U962 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col5a2Q3U962 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col5a2Q3U962 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col5a2Q3U962 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col5a2Q3U962 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col5a2Q3U962 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Col5a2Q3U962 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col5a2Q3U962 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col5a2Q3U962 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col5a2Q3U962 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col5a2Q3U962 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC23.62■■□□□ 1.37
Col5a2Q3U962 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col5a2Q3U962 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col5a2Q3U962 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col5a2Q3U962 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.61■■□□□ 1.37
Col5a2Q3U962 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col5a2Q3U962 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col5a2Q3U962 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Col5a2Q3U962 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col5a2Q3U962 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col5a2Q3U962 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col5a2Q3U962 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col5a2Q3U962 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col5a2Q3U962 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col5a2Q3U962 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.59■■□□□ 1.37
Col5a2Q3U962 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col5a2Q3U962 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col5a2Q3U962 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.58■■□□□ 1.37
Col5a2Q3U962 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col5a2Q3U962 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.58■■□□□ 1.37
Col5a2Q3U962 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col5a2Q3U962 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Col5a2Q3U962 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col5a2Q3U962 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col5a2Q3U962 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col5a2Q3U962 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col5a2Q3U962 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Col5a2Q3U962 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col5a2Q3U962 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.57■■□□□ 1.36
Col5a2Q3U962 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col5a2Q3U962 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col5a2Q3U962 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col5a2Q3U962 Gm13836-201ENSMUST00000121159 501 ntBASIC23.56■■□□□ 1.36
Col5a2Q3U962 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.56■■□□□ 1.36
Col5a2Q3U962 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col5a2Q3U962 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col5a2Q3U962 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col5a2Q3U962 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
Col5a2Q3U962 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
Col5a2Q3U962 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC23.55■■□□□ 1.36
Col5a2Q3U962 Rab3c-203ENSMUST00000224180 967 ntBASIC23.55■■□□□ 1.36
Col5a2Q3U962 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Col5a2Q3U962 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col5a2Q3U962 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms