Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cul4aQ3TCH7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cul4aQ3TCH7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Cul4aQ3TCH7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cul4aQ3TCH7 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.67■□□□□ 0.9
Cul4aQ3TCH7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.67■□□□□ 0.9
Cul4aQ3TCH7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cul4aQ3TCH7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cul4aQ3TCH7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cul4aQ3TCH7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cul4aQ3TCH7 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.65■□□□□ 0.9
Cul4aQ3TCH7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cul4aQ3TCH7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cul4aQ3TCH7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.64■□□□□ 0.9
Cul4aQ3TCH7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cul4aQ3TCH7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.64■□□□□ 0.89
Cul4aQ3TCH7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cul4aQ3TCH7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cul4aQ3TCH7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cul4aQ3TCH7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cul4aQ3TCH7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cul4aQ3TCH7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 AA386476-201ENSMUST00000098781 1665 ntBASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Gm22238-201ENSMUST00000175222 88 ntBASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cul4aQ3TCH7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cul4aQ3TCH7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cul4aQ3TCH7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.6■□□□□ 0.89
Cul4aQ3TCH7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cul4aQ3TCH7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cul4aQ3TCH7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cul4aQ3TCH7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cul4aQ3TCH7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cul4aQ3TCH7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cul4aQ3TCH7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.58■□□□□ 0.89
Cul4aQ3TCH7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cul4aQ3TCH7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cul4aQ3TCH7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cul4aQ3TCH7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cul4aQ3TCH7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cul4aQ3TCH7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms