Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cks1bP61025 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.91□□□□□ -0.18
Cks1bP61025 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Cks1bP61025 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.91□□□□□ -0.18
Cks1bP61025 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cks1bP61025 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cks1bP61025 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.9□□□□□ -0.18
Cks1bP61025 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cks1bP61025 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.9□□□□□ -0.18
Cks1bP61025 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cks1bP61025 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.89□□□□□ -0.19
Cks1bP61025 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Cks1bP61025 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cks1bP61025 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cks1bP61025 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Cks1bP61025 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cks1bP61025 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cks1bP61025 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cks1bP61025 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Cks1bP61025 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cks1bP61025 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cks1bP61025 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cks1bP61025 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.87□□□□□ -0.19
Cks1bP61025 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cks1bP61025 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cks1bP61025 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.87□□□□□ -0.19
Cks1bP61025 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1bP61025 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cks1bP61025 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cks1bP61025 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.86□□□□□ -0.19
Cks1bP61025 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.86□□□□□ -0.19
Cks1bP61025 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.86□□□□□ -0.19
Cks1bP61025 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cks1bP61025 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1bP61025 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms