Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sem1P60897 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.68■□□□□ 0.58
Sem1P60897 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sem1P60897 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sem1P60897 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sem1P60897 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sem1P60897 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sem1P60897 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sem1P60897 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.67■□□□□ 0.58
Sem1P60897 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sem1P60897 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sem1P60897 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sem1P60897 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Sem1P60897 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sem1P60897 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.66■□□□□ 0.58
Sem1P60897 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.66■□□□□ 0.58
Sem1P60897 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.66■□□□□ 0.58
Sem1P60897 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sem1P60897 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sem1P60897 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sem1P60897 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sem1P60897 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Sem1P60897 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sem1P60897 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sem1P60897 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sem1P60897 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sem1P60897 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Sem1P60897 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sem1P60897 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sem1P60897 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sem1P60897 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sem1P60897 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sem1P60897 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sem1P60897 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sem1P60897 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sem1P60897 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sem1P60897 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sem1P60897 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sem1P60897 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sem1P60897 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Sem1P60897 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sem1P60897 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Gm27322-201ENSMUST00000184007 104 ntBASIC18.62■□□□□ 0.57
Sem1P60897 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sem1P60897 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.61■□□□□ 0.57
Sem1P60897 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sem1P60897 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sem1P60897 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sem1P60897 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sem1P60897 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sem1P60897 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Sem1P60897 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sem1P60897 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sem1P60897 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sem1P60897 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sem1P60897 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms