Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne2P59108 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cpne2P59108 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne2P59108 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpne2P59108 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne2P59108 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne2P59108 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne2P59108 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne2P59108 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpne2P59108 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpne2P59108 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cpne2P59108 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.47■□□□□ 0.23
Cpne2P59108 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.47■□□□□ 0.23
Cpne2P59108 Gm43566-201ENSMUST00000196851 808 ntBASIC16.47■□□□□ 0.23
Cpne2P59108 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpne2P59108 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne2P59108 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cpne2P59108 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.47■□□□□ 0.23
Cpne2P59108 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne2P59108 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Gm13238-201ENSMUST00000117655 780 ntBASIC16.46■□□□□ 0.23
Cpne2P59108 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne2P59108 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.45■□□□□ 0.22
Cpne2P59108 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.45■□□□□ 0.22
Cpne2P59108 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cpne2P59108 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.45■□□□□ 0.22
Cpne2P59108 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cpne2P59108 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne2P59108 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne2P59108 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne2P59108 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne2P59108 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cpne2P59108 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne2P59108 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne2P59108 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cpne2P59108 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne2P59108 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cpne2P59108 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.43■□□□□ 0.22
Cpne2P59108 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cpne2P59108 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cpne2P59108 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Cpne2P59108 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cpne2P59108 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.43■□□□□ 0.22
Cpne2P59108 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne2P59108 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cpne2P59108 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne2P59108 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Cpne2P59108 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cpne2P59108 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cpne2P59108 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne2P59108 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne2P59108 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne2P59108 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne2P59108 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne2P59108 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne2P59108 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.42■□□□□ 0.22
Cpne2P59108 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpne2P59108 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpne2P59108 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cpne2P59108 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms