Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs2P54869 Gm12441-201ENSMUST00000121806 588 ntBASIC22■■□□□ 1.11
Hmgcs2P54869 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs2P54869 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22■■□□□ 1.11
Hmgcs2P54869 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs2P54869 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs2P54869 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Hmgcs2P54869 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcs2P54869 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Gm13146-201ENSMUST00000118508 780 ntBASIC21.98■■□□□ 1.11
Hmgcs2P54869 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Gm38205-201ENSMUST00000192243 258 ntBASIC21.98■■□□□ 1.11
Hmgcs2P54869 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs2P54869 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Hmgcs2P54869 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
Hmgcs2P54869 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
Hmgcs2P54869 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs2P54869 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.96■■□□□ 1.11
Hmgcs2P54869 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Hmgcs2P54869 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs2P54869 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.94■■□□□ 1.1
Hmgcs2P54869 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Gm10653-202ENSMUST00000139570 835 ntBASIC21.94■■□□□ 1.1
Hmgcs2P54869 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs2P54869 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcs2P54869 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcs2P54869 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.93■■□□□ 1.1
Hmgcs2P54869 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcs2P54869 Gm4968-201ENSMUST00000071458 858 ntBASIC21.93■■□□□ 1.1
Hmgcs2P54869 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcs2P54869 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Hmgcs2P54869 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Hmgcs2P54869 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs2P54869 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs2P54869 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs2P54869 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs2P54869 Nespas-201ENSMUST00000143738 1083 ntBASIC21.92■■□□□ 1.1
Hmgcs2P54869 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs2P54869 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.92■■□□□ 1.1
Hmgcs2P54869 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs2P54869 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs2P54869 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms