Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.47■□□□□ 0.71
Atxn1P54254 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Atxn1P54254 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atxn1P54254 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atxn1P54254 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.46■□□□□ 0.71
Atxn1P54254 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atxn1P54254 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
Atxn1P54254 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atxn1P54254 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atxn1P54254 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atxn1P54254 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Atxn1P54254 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atxn1P54254 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atxn1P54254 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Atxn1P54254 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atxn1P54254 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atxn1P54254 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atxn1P54254 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atxn1P54254 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atxn1P54254 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.45■□□□□ 0.7
Atxn1P54254 Gm7514-201ENSMUST00000209475 934 ntBASIC19.45■□□□□ 0.7
Atxn1P54254 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atxn1P54254 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Reep4-203ENSMUST00000226563 1444 ntBASIC19.44■□□□□ 0.7
Atxn1P54254 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atxn1P54254 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.44■□□□□ 0.7
Atxn1P54254 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.44■□□□□ 0.7
Atxn1P54254 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn1P54254 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn1P54254 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn1P54254 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Atxn1P54254 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn1P54254 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.43■□□□□ 0.7
Atxn1P54254 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.43■□□□□ 0.7
Atxn1P54254 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Atxn1P54254 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn1P54254 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atxn1P54254 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn1P54254 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn1P54254 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn1P54254 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.42■□□□□ 0.7
Atxn1P54254 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.42■□□□□ 0.7
Atxn1P54254 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Atxn1P54254 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atxn1P54254 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn1P54254 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.42■□□□□ 0.7
Atxn1P54254 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.41■□□□□ 0.7
Atxn1P54254 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atxn1P54254 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atxn1P54254 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atxn1P54254 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atxn1P54254 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.41■□□□□ 0.7
Atxn1P54254 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.41■□□□□ 0.7
Atxn1P54254 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atxn1P54254 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atxn1P54254 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn1P54254 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn1P54254 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn1P54254 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn1P54254 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn1P54254 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Atxn1P54254 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.4■□□□□ 0.7
Atxn1P54254 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.4■□□□□ 0.7
Atxn1P54254 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Atxn1P54254 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn1P54254 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn1P54254 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn1P54254 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Atxn1P54254 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atxn1P54254 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atxn1P54254 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.39■□□□□ 0.69
Atxn1P54254 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Atxn1P54254 Gm13168-201ENSMUST00000121771 632 ntBASIC19.39■□□□□ 0.69
Atxn1P54254 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn1P54254 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms