Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk1P53668 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.23■□□□□ 0.67
Limk1P53668 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk1P53668 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk1P53668 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Limk1P53668 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.23■□□□□ 0.67
Limk1P53668 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.23■□□□□ 0.67
Limk1P53668 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.23■□□□□ 0.67
Limk1P53668 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk1P53668 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk1P53668 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.23■□□□□ 0.67
Limk1P53668 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk1P53668 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Limk1P53668 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk1P53668 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.22■□□□□ 0.67
Limk1P53668 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Limk1P53668 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Limk1P53668 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Limk1P53668 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Limk1P53668 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Limk1P53668 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.2■□□□□ 0.66
Limk1P53668 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Limk1P53668 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Limk1P53668 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Limk1P53668 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
Limk1P53668 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Limk1P53668 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Limk1P53668 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.19■□□□□ 0.66
Limk1P53668 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.19■□□□□ 0.66
Limk1P53668 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Limk1P53668 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Gm27801-201ENSMUST00000184174 223 ntBASIC19.19■□□□□ 0.66
Limk1P53668 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Limk1P53668 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Limk1P53668 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Limk1P53668 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Limk1P53668 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Gm13168-201ENSMUST00000121771 632 ntBASIC19.18■□□□□ 0.66
Limk1P53668 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Limk1P53668 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Limk1P53668 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Limk1P53668 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.17■□□□□ 0.66
Limk1P53668 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.17■□□□□ 0.66
Limk1P53668 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.17■□□□□ 0.66
Limk1P53668 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.17■□□□□ 0.66
Limk1P53668 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Limk1P53668 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Limk1P53668 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Limk1P53668 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk1P53668 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.16■□□□□ 0.66
Limk1P53668 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk1P53668 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Limk1P53668 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk1P53668 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Limk1P53668 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk1P53668 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Limk1P53668 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.15■□□□□ 0.66
Limk1P53668 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk1P53668 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Limk1P53668 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.15■□□□□ 0.66
Limk1P53668 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.15■□□□□ 0.66
Limk1P53668 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Limk1P53668 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms