Protein–RNA interactions for Protein: P51906

Slc1a1, Excitatory amino acid transporter 3, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a1P51906 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a1P51906 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a1P51906 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a1P51906 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a1P51906 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a1P51906 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a1P51906 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a1P51906 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.59■□□□□ 0.89
Slc1a1P51906 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.59■□□□□ 0.89
Slc1a1P51906 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a1P51906 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a1P51906 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a1P51906 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a1P51906 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc1a1P51906 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.58■□□□□ 0.89
Slc1a1P51906 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.58■□□□□ 0.89
Slc1a1P51906 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.58■□□□□ 0.89
Slc1a1P51906 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Slc1a1P51906 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc1a1P51906 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Slc1a1P51906 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc1a1P51906 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc1a1P51906 Rps24-207ENSMUST00000224568 714 ntBASIC20.58■□□□□ 0.89
Slc1a1P51906 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Slc1a1P51906 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.58■□□□□ 0.89
Slc1a1P51906 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc1a1P51906 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc1a1P51906 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc1a1P51906 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a1P51906 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc1a1P51906 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a1P51906 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.57■□□□□ 0.88
Slc1a1P51906 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc1a1P51906 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.57■□□□□ 0.88
Slc1a1P51906 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a1P51906 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.57■□□□□ 0.88
Slc1a1P51906 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a1P51906 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Slc1a1P51906 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc1a1P51906 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc1a1P51906 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 Gm14117-201ENSMUST00000122417 843 ntBASIC20.56■□□□□ 0.88
Slc1a1P51906 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a1P51906 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Slc1a1P51906 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a1P51906 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Slc1a1P51906 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a1P51906 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a1P51906 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a1P51906 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.54■□□□□ 0.88
Slc1a1P51906 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a1P51906 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc1a1P51906 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a1P51906 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a1P51906 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a1P51906 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc1a1P51906 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a1P51906 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a1P51906 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Slc1a1P51906 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
Slc1a1P51906 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a1P51906 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a1P51906 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc1a1P51906 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a1P51906 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.52■□□□□ 0.88
Slc1a1P51906 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a1P51906 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a1P51906 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Slc1a1P51906 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc1a1P51906 AA386476-201ENSMUST00000098781 1665 ntBASIC20.51■□□□□ 0.87
Slc1a1P51906 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a1P51906 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a1P51906 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Slc1a1P51906 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a1P51906 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.51■□□□□ 0.87
Slc1a1P51906 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Slc1a1P51906 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a1P51906 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms