Protein–RNA interactions for Protein: P51791

Clcn3, H(+)/Cl(-) exchange transporter 3, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3P51791 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Clcn3P51791 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn3P51791 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn3P51791 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn3P51791 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clcn3P51791 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn3P51791 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.42■■□□□ 1.02
Clcn3P51791 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.42■■□□□ 1.02
Clcn3P51791 Reep4-203ENSMUST00000226563 1444 ntBASIC21.42■■□□□ 1.02
Clcn3P51791 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.42■■□□□ 1.02
Clcn3P51791 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
Clcn3P51791 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Clcn3P51791 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn3P51791 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Clcn3P51791 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Clcn3P51791 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn3P51791 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn3P51791 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn3P51791 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn3P51791 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.41■■□□□ 1.02
Clcn3P51791 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn3P51791 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn3P51791 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.41■■□□□ 1.02
Clcn3P51791 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.41■■□□□ 1.02
Clcn3P51791 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clcn3P51791 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.41■■□□□ 1.02
Clcn3P51791 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.41■■□□□ 1.02
Clcn3P51791 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn3P51791 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.4■■□□□ 1.02
Clcn3P51791 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn3P51791 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn3P51791 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn3P51791 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn3P51791 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Clcn3P51791 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clcn3P51791 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Clcn3P51791 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Clcn3P51791 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.4■■□□□ 1.02
Clcn3P51791 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.39■■□□□ 1.02
Clcn3P51791 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Clcn3P51791 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Clcn3P51791 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.39■■□□□ 1.01
Clcn3P51791 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.39■■□□□ 1.01
Clcn3P51791 Gm37179-201ENSMUST00000194862 823 ntBASIC21.39■■□□□ 1.01
Clcn3P51791 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.39■■□□□ 1.01
Clcn3P51791 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clcn3P51791 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Clcn3P51791 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Clcn3P51791 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Clcn3P51791 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.38■■□□□ 1.01
Clcn3P51791 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.38■■□□□ 1.01
Clcn3P51791 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Clcn3P51791 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Clcn3P51791 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Clcn3P51791 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Clcn3P51791 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clcn3P51791 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Clcn3P51791 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Clcn3P51791 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.37■■□□□ 1.01
Clcn3P51791 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.37■■□□□ 1.01
Clcn3P51791 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Clcn3P51791 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Clcn3P51791 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn3P51791 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn3P51791 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.36■■□□□ 1.01
Clcn3P51791 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Clcn3P51791 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.36■■□□□ 1.01
Clcn3P51791 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn3P51791 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn3P51791 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn3P51791 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Clcn3P51791 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clcn3P51791 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Clcn3P51791 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn3P51791 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn3P51791 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Clcn3P51791 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Clcn3P51791 Gm13234-201ENSMUST00000120010 747 ntBASIC21.35■■□□□ 1.01
Clcn3P51791 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn3P51791 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Clcn3P51791 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.35■■□□□ 1.01
Clcn3P51791 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms