Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl12P40224 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.42■□□□□ 0.86
Cxcl12P40224 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Cxcl12P40224 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcl12P40224 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcl12P40224 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcl12P40224 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cxcl12P40224 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcl12P40224 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcl12P40224 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcl12P40224 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcl12P40224 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcl12P40224 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cxcl12P40224 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcl12P40224 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cxcl12P40224 Gm13534-201ENSMUST00000121169 513 ntBASIC20.41■□□□□ 0.86
Cxcl12P40224 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcl12P40224 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.41■□□□□ 0.86
Cxcl12P40224 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.41■□□□□ 0.86
Cxcl12P40224 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cxcl12P40224 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcl12P40224 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcl12P40224 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcl12P40224 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcl12P40224 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cxcl12P40224 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcl12P40224 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcl12P40224 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcl12P40224 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcl12P40224 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cxcl12P40224 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cxcl12P40224 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cxcl12P40224 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcl12P40224 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcl12P40224 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcl12P40224 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcl12P40224 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cxcl12P40224 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.39■□□□□ 0.85
Cxcl12P40224 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cxcl12P40224 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcl12P40224 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Cxcl12P40224 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Cxcl12P40224 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.38■□□□□ 0.85
Cxcl12P40224 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl12P40224 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Cxcl12P40224 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.37■□□□□ 0.85
Cxcl12P40224 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cxcl12P40224 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl12P40224 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl12P40224 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl12P40224 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.37■□□□□ 0.85
Cxcl12P40224 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl12P40224 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cxcl12P40224 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl12P40224 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl12P40224 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl12P40224 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cxcl12P40224 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.36■□□□□ 0.85
Cxcl12P40224 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.36■□□□□ 0.85
Cxcl12P40224 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cxcl12P40224 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cxcl12P40224 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cxcl12P40224 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcl12P40224 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcl12P40224 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcl12P40224 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Gm6576-201ENSMUST00000169678 883 ntBASIC20.34■□□□□ 0.85
Cxcl12P40224 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Rab3c-203ENSMUST00000224180 967 ntBASIC20.34■□□□□ 0.85
Cxcl12P40224 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cxcl12P40224 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cxcl12P40224 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl12P40224 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cxcl12P40224 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcl12P40224 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcl12P40224 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cxcl12P40224 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.33■□□□□ 0.85
Cxcl12P40224 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcl12P40224 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcl12P40224 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcl12P40224 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cxcl12P40224 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms