Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LdlrP35951 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LdlrP35951 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
LdlrP35951 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LdlrP35951 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LdlrP35951 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LdlrP35951 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.5■□□□□ 0.71
LdlrP35951 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LdlrP35951 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.5■□□□□ 0.71
LdlrP35951 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LdlrP35951 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.5■□□□□ 0.71
LdlrP35951 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.5■□□□□ 0.71
LdlrP35951 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.5■□□□□ 0.71
LdlrP35951 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LdlrP35951 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LdlrP35951 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LdlrP35951 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LdlrP35951 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
LdlrP35951 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LdlrP35951 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LdlrP35951 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LdlrP35951 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LdlrP35951 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LdlrP35951 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LdlrP35951 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LdlrP35951 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.48■□□□□ 0.71
LdlrP35951 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LdlrP35951 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LdlrP35951 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LdlrP35951 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LdlrP35951 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
LdlrP35951 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.47■□□□□ 0.71
LdlrP35951 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LdlrP35951 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LdlrP35951 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LdlrP35951 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LdlrP35951 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
LdlrP35951 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
LdlrP35951 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.46■□□□□ 0.71
LdlrP35951 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LdlrP35951 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LdlrP35951 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LdlrP35951 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LdlrP35951 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LdlrP35951 Gm45417-201ENSMUST00000209533 758 ntBASIC19.45■□□□□ 0.7
LdlrP35951 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LdlrP35951 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LdlrP35951 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LdlrP35951 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LdlrP35951 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LdlrP35951 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LdlrP35951 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.44■□□□□ 0.7
LdlrP35951 Golgb1-201ENSMUST00000023534 498 ntBASIC19.44■□□□□ 0.7
LdlrP35951 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LdlrP35951 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
LdlrP35951 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.43■□□□□ 0.7
LdlrP35951 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.43■□□□□ 0.7
LdlrP35951 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LdlrP35951 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LdlrP35951 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LdlrP35951 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.42■□□□□ 0.7
LdlrP35951 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LdlrP35951 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LdlrP35951 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.41■□□□□ 0.7
LdlrP35951 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LdlrP35951 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LdlrP35951 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LdlrP35951 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.41■□□□□ 0.7
LdlrP35951 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LdlrP35951 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
LdlrP35951 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LdlrP35951 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms