Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a1P31648 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a1P31648 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a1P31648 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a1P31648 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a1P31648 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a1P31648 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Slc6a1P31648 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a1P31648 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Slc6a1P31648 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.81■□□□□ 0.28
Slc6a1P31648 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Slc6a1P31648 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc6a1P31648 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a1P31648 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a1P31648 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a1P31648 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Slc6a1P31648 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Slc6a1P31648 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc6a1P31648 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a1P31648 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc6a1P31648 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Slc6a1P31648 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slc6a1P31648 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a1P31648 Grk6-206ENSMUST00000224995 2971 ntBASIC16.79■□□□□ 0.28
Slc6a1P31648 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a1P31648 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a1P31648 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a1P31648 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.79■□□□□ 0.28
Slc6a1P31648 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.79■□□□□ 0.28
Slc6a1P31648 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc6a1P31648 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slc6a1P31648 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a1P31648 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
Slc6a1P31648 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Slc6a1P31648 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a1P31648 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Slc6a1P31648 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a1P31648 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a1P31648 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a1P31648 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a1P31648 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Slc6a1P31648 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.77■□□□□ 0.28
Slc6a1P31648 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Slc6a1P31648 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.77■□□□□ 0.28
Slc6a1P31648 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.77■□□□□ 0.28
Slc6a1P31648 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc6a1P31648 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc6a1P31648 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.77■□□□□ 0.27
Slc6a1P31648 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc6a1P31648 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.77■□□□□ 0.27
Slc6a1P31648 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.77■□□□□ 0.27
Slc6a1P31648 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc6a1P31648 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Slc6a1P31648 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.76■□□□□ 0.27
Slc6a1P31648 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.76■□□□□ 0.27
Slc6a1P31648 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Slc6a1P31648 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Slc6a1P31648 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc6a1P31648 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms