Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gja4P28235 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gja4P28235 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gja4P28235 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gja4P28235 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gja4P28235 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gja4P28235 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.73■□□□□ 0.75
Gja4P28235 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gja4P28235 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gja4P28235 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gja4P28235 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gja4P28235 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gja4P28235 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gja4P28235 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.72■□□□□ 0.75
Gja4P28235 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.72■□□□□ 0.75
Gja4P28235 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.72■□□□□ 0.75
Gja4P28235 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.72■□□□□ 0.75
Gja4P28235 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gja4P28235 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gja4P28235 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Gja4P28235 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.71■□□□□ 0.75
Gja4P28235 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.71■□□□□ 0.75
Gja4P28235 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.71■□□□□ 0.75
Gja4P28235 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gja4P28235 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gja4P28235 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.7■□□□□ 0.74
Gja4P28235 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gja4P28235 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gja4P28235 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.7■□□□□ 0.74
Gja4P28235 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gja4P28235 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gja4P28235 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gja4P28235 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gja4P28235 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gja4P28235 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gja4P28235 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.69■□□□□ 0.74
Gja4P28235 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Mir5133-201ENSMUST00000174955 77 ntBASIC19.69■□□□□ 0.74
Gja4P28235 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.69■□□□□ 0.74
Gja4P28235 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Gja4P28235 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gja4P28235 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.69■□□□□ 0.74
Gja4P28235 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.69■□□□□ 0.74
Gja4P28235 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gja4P28235 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gja4P28235 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gja4P28235 Gm13146-201ENSMUST00000118508 780 ntBASIC19.68■□□□□ 0.74
Gja4P28235 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gja4P28235 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gja4P28235 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.67■□□□□ 0.74
Gja4P28235 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.67■□□□□ 0.74
Gja4P28235 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.67■□□□□ 0.74
Gja4P28235 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Gja4P28235 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gja4P28235 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Gja4P28235 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gja4P28235 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.66■□□□□ 0.74
Gja4P28235 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.66■□□□□ 0.74
Gja4P28235 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Gja4P28235 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gja4P28235 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gja4P28235 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gja4P28235 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gja4P28235 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.65■□□□□ 0.74
Gja4P28235 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gja4P28235 Gm38205-201ENSMUST00000192243 258 ntBASIC19.65■□□□□ 0.74
Gja4P28235 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gja4P28235 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gja4P28235 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gja4P28235 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gja4P28235 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms