Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd44P15379 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd44P15379 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd44P15379 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cd44P15379 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd44P15379 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cd44P15379 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.66■□□□□ 0.9
Cd44P15379 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cd44P15379 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cd44P15379 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.66■□□□□ 0.9
Cd44P15379 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd44P15379 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd44P15379 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd44P15379 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.65■□□□□ 0.9
Cd44P15379 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.65■□□□□ 0.9
Cd44P15379 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.65■□□□□ 0.9
Cd44P15379 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd44P15379 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.64■□□□□ 0.9
Cd44P15379 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
Cd44P15379 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Cd44P15379 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd44P15379 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Cd44P15379 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.64■□□□□ 0.89
Cd44P15379 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd44P15379 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd44P15379 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cd44P15379 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Cd44P15379 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.64■□□□□ 0.89
Cd44P15379 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd44P15379 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cd44P15379 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd44P15379 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.63■□□□□ 0.89
Cd44P15379 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd44P15379 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd44P15379 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd44P15379 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.62■□□□□ 0.89
Cd44P15379 Etf1-202ENSMUST00000180351 108 ntBASIC20.62■□□□□ 0.89
Cd44P15379 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.62■□□□□ 0.89
Cd44P15379 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cd44P15379 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd44P15379 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.61■□□□□ 0.89
Cd44P15379 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd44P15379 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cd44P15379 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd44P15379 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd44P15379 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd44P15379 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd44P15379 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.61■□□□□ 0.89
Cd44P15379 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.61■□□□□ 0.89
Cd44P15379 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd44P15379 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Cd44P15379 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Cd44P15379 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Gm7417-201ENSMUST00000192950 473 ntBASIC20.6■□□□□ 0.89
Cd44P15379 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd44P15379 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Cd44P15379 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd44P15379 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd44P15379 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd44P15379 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd44P15379 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cd44P15379 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.58■□□□□ 0.89
Cd44P15379 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd44P15379 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cd44P15379 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.58■□□□□ 0.89
Cd44P15379 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cd44P15379 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cd44P15379 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cd44P15379 Gm5812-201ENSMUST00000061073 957 ntBASIC20.58■□□□□ 0.89
Cd44P15379 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cd44P15379 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cd44P15379 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd44P15379 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd44P15379 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd44P15379 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
Cd44P15379 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd44P15379 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd44P15379 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms