Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Srp54P14576 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp54P14576 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Srp54P14576 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp54P14576 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Srp54P14576 Gm42642-201ENSMUST00000200683 355 ntBASIC19.25■□□□□ 0.67
Srp54P14576 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp54P14576 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp54P14576 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp54P14576 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Srp54P14576 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Srp54P14576 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Srp54P14576 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Srp54P14576 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.24■□□□□ 0.67
Srp54P14576 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Srp54P14576 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Srp54P14576 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Srp54P14576 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Srp54P14576 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Srp54P14576 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Srp54P14576 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp54P14576 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srp54P14576 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Srp54P14576 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srp54P14576 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Srp54P14576 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Srp54P14576 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Srp54P14576 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.22■□□□□ 0.67
Srp54P14576 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srp54P14576 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Srp54P14576 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srp54P14576 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srp54P14576 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srp54P14576 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.21■□□□□ 0.67
Srp54P14576 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srp54P14576 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.21■□□□□ 0.67
Srp54P14576 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srp54P14576 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srp54P14576 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srp54P14576 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srp54P14576 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Srp54P14576 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Srp54P14576 Gm42569-201ENSMUST00000200539 472 ntBASIC19.2■□□□□ 0.66
Srp54P14576 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.2■□□□□ 0.66
Srp54P14576 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp54P14576 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Srp54P14576 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.19■□□□□ 0.66
Srp54P14576 Gm26571-201ENSMUST00000181399 666 ntBASIC19.19■□□□□ 0.66
Srp54P14576 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.19■□□□□ 0.66
Srp54P14576 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Srp54P14576 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srp54P14576 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.19■□□□□ 0.66
Srp54P14576 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srp54P14576 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.18■□□□□ 0.66
Srp54P14576 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Srp54P14576 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.18■□□□□ 0.66
Srp54P14576 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srp54P14576 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms