Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04945 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
P04945 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04945 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.85■□□□□ 0.29
P04945 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.85■□□□□ 0.29
P04945 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04945 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04945 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
P04945 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04945 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04945 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.83■□□□□ 0.28
P04945 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04945 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.83■□□□□ 0.28
P04945 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.83■□□□□ 0.28
P04945 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04945 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
P04945 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04945 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04945 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.82■□□□□ 0.28
P04945 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.82■□□□□ 0.28
P04945 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
P04945 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.82■□□□□ 0.28
P04945 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
P04945 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P04945 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04945 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
P04945 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
P04945 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
P04945 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
P04945 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.81■□□□□ 0.28
P04945 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
P04945 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04945 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
P04945 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04945 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.8■□□□□ 0.28
P04945 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04945 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04945 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P04945 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P04945 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04945 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
P04945 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04945 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04945 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04945 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04945 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P04945 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P04945 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
P04945 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
P04945 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.78■□□□□ 0.28
P04945 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P04945 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04945 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P04945 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P04945 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms