Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IghmP01872 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
IghmP01872 Gm14117-201ENSMUST00000122417 843 ntBASIC18.45■□□□□ 0.54
IghmP01872 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IghmP01872 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
IghmP01872 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.44■□□□□ 0.54
IghmP01872 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.44■□□□□ 0.54
IghmP01872 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.44■□□□□ 0.54
IghmP01872 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IghmP01872 AA386476-201ENSMUST00000098781 1665 ntBASIC18.44■□□□□ 0.54
IghmP01872 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IghmP01872 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IghmP01872 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IghmP01872 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IghmP01872 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
IghmP01872 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
IghmP01872 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
IghmP01872 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IghmP01872 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.42■□□□□ 0.54
IghmP01872 Rps24-207ENSMUST00000224568 714 ntBASIC18.42■□□□□ 0.54
IghmP01872 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.42■□□□□ 0.54
IghmP01872 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IghmP01872 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
IghmP01872 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
IghmP01872 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IghmP01872 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IghmP01872 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IghmP01872 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IghmP01872 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IghmP01872 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.4■□□□□ 0.54
IghmP01872 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IghmP01872 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IghmP01872 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
IghmP01872 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.39■□□□□ 0.53
IghmP01872 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
IghmP01872 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IghmP01872 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IghmP01872 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.39■□□□□ 0.53
IghmP01872 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
IghmP01872 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IghmP01872 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
IghmP01872 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IghmP01872 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IghmP01872 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
IghmP01872 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IghmP01872 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IghmP01872 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.37■□□□□ 0.53
IghmP01872 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IghmP01872 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IghmP01872 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IghmP01872 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
IghmP01872 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IghmP01872 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
IghmP01872 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IghmP01872 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IghmP01872 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IghmP01872 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IghmP01872 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IghmP01872 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.35■□□□□ 0.53
IghmP01872 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.35■□□□□ 0.53
IghmP01872 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.35■□□□□ 0.53
IghmP01872 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
IghmP01872 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IghmP01872 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
IghmP01872 Golgb1-201ENSMUST00000023534 498 ntBASIC18.35■□□□□ 0.53
IghmP01872 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
IghmP01872 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
IghmP01872 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IghmP01872 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.34■□□□□ 0.53
IghmP01872 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IghmP01872 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IghmP01872 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IghmP01872 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.34■□□□□ 0.53
IghmP01872 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms